BuscoPhylo : Busco-based phylogenomics analysis tool

In the age of Big Data in genomics, an abundance of genome sequences from living organisms are being made publicly available in databases like GenBank.
To streamline phylogenomic analysis, BuscoPhylo offers a fully automated pipeline, facilitating quick and comprehensive BUSCO-based analysis using assembled genome/transcriptome/proteome sequences as inputs. This user-friendly, free, online webserver accepts inputs in FASTA format and allows users to export publication-ready trees and all pipeline results for downstream analyses.

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Method Overview


  • 06 February 2023 | BuscoPhylo API now available on PyPI for easy installation and integration into your workflow
  • 06 December 2022 | BuscoPhylo uses the current stable version of BUSCO v5.4.3!
  • 17 October 2022 | The paper of BuscoPhylo is published, please cite: Sahbou, A.-E.; Iraqi, D.; Mentag, R.; Khayi, S. BuscoPhylo: A Webserver for Busco-Based Phylogenomic Analysis for Non-Specialists. Sci Rep 2022, 12, 17352, doi:10.1038/s41598-022-22461-0.


If you have any suggestions, feedback and bug reports, please contact us at slimane.khayi@inra.ma or use the contact form on the website.